/CEMT/B35054_1_lane_gembs

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SAMPLE B35054_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1014676210 100.00 % 507338105 100.00 % 507338105 100.00 %
General Reads 997475889 98.30 % 501450051 98.84 % 496025838 97.77 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 8322632 0.82 % 4179627 0.82 % 4143005 0.82 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8877689 0.87 % 1708427 0.34 % 7169262 1.41 %
Bisulfite_reads C2T 512824372 50.54 % 257645264 50.78 % 255179108 50.30 %
Bisulfite_reads G2A 492974149 48.58 % 247984414 48.88 % 244989735 48.29 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 441714328
Average Unique 87.07 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59965675414 39.14 % 24654266242 32.18 % 35311409172 46.09 %
Base Counts Overall C 16028082871 10.46 % 643641578 0.84 % 15384441293 20.08 %
Base Counts Overall G 15924260649 10.39 % 15283445767 19.95 % 640814882 0.84 %
Base Counts Overall T 60267154588 39.33 % 35513228801 46.36 % 24753925787 32.31 %
Base Counts Overall N 1030934188 0.67 % 513471467 0.67 % 517462721 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9953037455044252
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 488608880



Mapping Quality

Mapping Quality Histogram
B35054_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B35054_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H2FWFCCX2_1_2