{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 95439400, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 89759049, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.05, 
            "paired": 95439400, 
            "paired_qc_failed": 0, 
            "read1": 47719700, 
            "read1_qc_failed": 0, 
            "read2": 47719700, 
            "read2_qc_failed": 0, 
            "paired_properly": 85492454, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 89.58, 
            "with_itself": 89001934, 
            "with_itself_qc_failed": 0, 
            "singletons": 757115, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.79, 
            "diff_chroms": 2464987, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 112771886, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109873578, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.43, 
            "paired": 112771886, 
            "paired_qc_failed": 0, 
            "read1": 56385943, 
            "read1_qc_failed": 0, 
            "read2": 56385943, 
            "read2_qc_failed": 0, 
            "paired_properly": 84952591, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 75.33, 
            "with_itself": 108164942, 
            "with_itself_qc_failed": 0, 
            "singletons": 1708636, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 1.52, 
            "diff_chroms": 19230639, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 38508793, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 16806779, 
            "paired_opt_dupes": 2395, 
            "dupes_pct": 0.43644
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 37110419, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 616930, 
            "paired_opt_dupes": 2436, 
            "dupes_pct": 0.016624
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 38477237, 
            "distinct_read_pairs": 21684394, 
            "one_read_pair": 11310034, 
            "two_read_pair": 6217108, 
            "NRF": 0.563564, 
            "PBC1": 0.521575, 
            "PBC2": 1.819179
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 37079658, 
            "distinct_read_pairs": 36465928, 
            "one_read_pair": 35868516, 
            "two_read_pair": 585863, 
            "NRF": 0.983448, 
            "PBC1": 0.983617, 
            "PBC2": 61.223385
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 43404028, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43404028, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43404028, 
            "paired_qc_failed": 0, 
            "read1": 21702014, 
            "read1_qc_failed": 0, 
            "read2": 21702014, 
            "read2_qc_failed": 0, 
            "paired_properly": 43404028, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43404028, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 72986978, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 72986978, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 72986978, 
            "paired_qc_failed": 0, 
            "read1": 36493489, 
            "read1_qc_failed": 0, 
            "read2": 36493489, 
            "read2_qc_failed": 0, 
            "paired_properly": 72986978, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 72986978, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 64049, 
        "Np": 0, 
        "N_opt": 64049, 
        "N_consv": 64049, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 150, 
            "corr_est_frag_len": 0.189528024177621, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.1527993, 
            "argmin_corr": 1500, 
            "min_corr": 0.1302568, 
            "NSC": 1.455033, 
            "RSC": 2.629309
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.26994641634
        }, 
        "rep1-pr1": {
            "FRiP": 0.294995575162
        }, 
        "rep1-pr2": {
            "FRiP": 0.294720427692
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.241451842197
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.227347692552, 
            "auc": 0.493830566585, 
            "ch_div": 0.135639813269, 
            "elbow_pt": 3.35984610399e-225, 
            "jsd": 0.673766706319, 
            "syn_auc": 0.50933338317, 
            "syn_elbow_pt": 0.255981460029, 
            "syn_jsd": 0.376216920607
        }
    ]
}