/CEMT/A95336_2_lane_gembs

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SAMPLE A95336_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1829294866 100.00 % 914647433 100.00 % 914647433 100.00 %
General Reads 1811507711 99.03 % 908977368 99.38 % 902530343 98.68 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 490414 0.03 % 246059 0.03 % 244355 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 17296741 0.95 % 5424006 0.59 % 11872735 1.30 %
Bisulfite_reads C2T 923869043 50.50 % 463346468 50.66 % 460522575 50.35 %
Bisulfite_reads G2A 888129082 48.55 % 445876959 48.75 % 442252123 48.35 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 787951101
Average Unique 86.15 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 106066695687 38.40 % 42515887116 30.78 % 63550808571 46.01 %
Base Counts Overall C 30712433486 11.12 % 1344206365 0.97 % 29368227121 21.26 %
Base Counts Overall G 30936390535 11.20 % 29418342081 21.30 % 1518048454 1.10 %
Base Counts Overall T 106643037134 38.61 % 63906317877 46.27 % 42736719257 30.94 %
Base Counts Overall N 1864967924 0.68 % 927008944 0.67 % 937958980 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9959644158721254
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 879532991



Mapping Quality

Mapping Quality Histogram
A95336_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95336_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYCCLCCXY_1_2
HYCCLCCXY_2_2