/CEMT/A95336_2_lane_gembs/HYCCLCCXY_2_2

BACK

SAMPLE A95336_2_lane_gembs LANE HYCCLCCXY_2_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 917451318 100.00 % 458725659 100.00 % 458725659 100.00 %
General Reads 908767892 99.05 % 455891429 99.38 % 452876463 98.72 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 244125 0.03 % 122465 0.03 % 121660 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8439301 0.92 % 2711765 0.59 % 5727536 1.25 %
Bisulfite_reads C2T 463479359 50.52 % 232391883 50.66 % 231087476 50.38 %
Bisulfite_reads G2A 445532658 48.56 % 223622011 48.75 % 221910647 48.38 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 395420625
Average Unique 86.20 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 53203138335 38.40 % 21324356520 30.79 % 31878781815 46.02 %
Base Counts Overall C 15401363654 11.12 % 673136632 0.97 % 14728227022 21.26 %
Base Counts Overall G 15512833685 11.20 % 14751282397 21.30 % 761551288 1.10 %
Base Counts Overall T 53482711580 38.61 % 32054632037 46.28 % 21428079543 30.94 %
Base Counts Overall N 935101764 0.67 % 464166923 0.67 % 470934841 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9960334116321103
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 441352961



Mapping Quality

Mapping Quality Histogram
HYCCLCCXY_2_2.mapq.png



Read Length

Read Length Reads
150 458725659
150 458725659



Insert Size Plot

Insert Size Histogram
HYCCLCCXY_2_2.isize.png