/CEMT/A95337_2_lane_gembs

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SAMPLE A95337_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1785656892 100.00 % 892828446 100.00 % 892828446 100.00 %
General Reads 1768020531 99.01 % 887950763 99.45 % 880069768 98.57 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 1200897 0.07 % 602814 0.07 % 598083 0.07 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 16435464 0.92 % 4274869 0.48 % 12160595 1.36 %
Bisulfite_reads C2T 902818586 50.56 % 453205061 50.76 % 449613525 50.36 %
Bisulfite_reads G2A 866402842 48.52 % 435348516 48.76 % 431054326 48.28 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 772948832
Average Unique 86.57 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 104370336917 38.71 % 42695847256 31.67 % 61674489661 45.75 %
Base Counts Overall C 29189818980 10.83 % 1140478332 0.85 % 28049340648 20.81 %
Base Counts Overall G 29274206215 10.86 % 27991586351 20.76 % 1282619864 0.95 %
Base Counts Overall T 104980999232 38.93 % 62086080503 46.05 % 42894918729 31.82 %
Base Counts Overall N 1818829348 0.67 % 903102904 0.67 % 915726444 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9955335874224406
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 859106018



Mapping Quality

Mapping Quality Histogram
A95337_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95337_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYCCLCCXY_4_2
HYCCLCCXY_3_2