/CEMT/A95337_2_lane_gembs/HYCCLCCXY_4_2

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SAMPLE A95337_2_lane_gembs LANE HYCCLCCXY_4_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 883225828 100.00 % 441612914 100.00 % 441612914 100.00 %
General Reads 874290823 98.99 % 439199086 99.45 % 435091737 98.52 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 594470 0.07 % 298482 0.07 % 295988 0.07 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8340535 0.94 % 2115346 0.48 % 6225189 1.41 %
Bisulfite_reads C2T 446419145 50.54 % 224148984 50.76 % 222270161 50.33 %
Bisulfite_reads G2A 428466148 48.51 % 215348584 48.76 % 213117564 48.26 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 382099868
Average Unique 86.52 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 51603228610 38.69 % 21114869966 31.66 % 30488358644 45.72 %
Base Counts Overall C 14453438212 10.84 % 565866300 0.85 % 13887571912 20.83 %
Base Counts Overall G 14484579152 10.86 % 13845512963 20.76 % 639066189 0.96 %
Base Counts Overall T 51929446597 38.94 % 30711142949 46.06 % 21218303648 31.82 %
Base Counts Overall N 896407457 0.67 % 446157836 0.67 % 450249621 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9952785605135915
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 424721930



Mapping Quality

Mapping Quality Histogram
HYCCLCCXY_4_2.mapq.png



Read Length

Read Length Reads
150 441612914
150 441612914



Insert Size Plot

Insert Size Histogram
HYCCLCCXY_4_2.isize.png