/CEMT/A95338_2_lane_gembs

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SAMPLE A95338_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1949411480 100.00 % 974705740 100.00 % 974705740 100.00 %
General Reads 1932347770 99.12 % 970726342 99.59 % 961621428 98.66 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 423772 0.02 % 212727 0.02 % 211045 0.02 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 16639938 0.85 % 3766671 0.39 % 12873267 1.32 %
Bisulfite_reads C2T 984470782 50.50 % 494272864 50.71 % 490197918 50.29 %
Bisulfite_reads G2A 948300760 48.65 % 476666205 48.90 % 471634555 48.39 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 846866012
Average Unique 86.88 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 114666727283 38.95 % 47498424426 32.27 % 67168302857 45.64 %
Base Counts Overall C 31317373507 10.64 % 1244340142 0.85 % 30073033365 20.43 %
Base Counts Overall G 31180820193 10.59 % 29861726187 20.29 % 1319094006 0.90 %
Base Counts Overall T 115189109564 39.13 % 67585362147 45.92 % 47603747417 32.34 %
Base Counts Overall N 2007102933 0.68 % 990713838 0.67 % 1016389095 0.69 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9957018585282554
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 939299845



Mapping Quality

Mapping Quality Histogram
A95338_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95338_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYHL2CCXY_1_2
HYHL2CCXY_2_2