/CEMT/A95338_2_lane_gembs/HYHL2CCXY_1_2

BACK

SAMPLE A95338_2_lane_gembs LANE HYHL2CCXY_1_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 973746624 100.00 % 486873312 100.00 % 486873312 100.00 %
General Reads 964976092 99.10 % 484829291 99.58 % 480146801 98.62 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 212229 0.02 % 106563 0.02 % 105666 0.02 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8558303 0.88 % 1937458 0.40 % 6620845 1.36 %
Bisulfite_reads C2T 491608332 50.49 % 246861813 50.70 % 244746519 50.27 %
Bisulfite_reads G2A 473579989 48.63 % 238074041 48.90 % 235505948 48.37 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 423180240
Average Unique 86.92 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 57281965512 38.96 % 23723645079 32.27 % 33558320433 45.65 %
Base Counts Overall C 15622565609 10.63 % 624090032 0.85 % 14998475577 20.40 %
Base Counts Overall G 15586389547 10.60 % 14914454953 20.29 % 671934594 0.91 %
Base Counts Overall T 57539050074 39.13 % 33758648263 45.92 % 23780401811 32.35 %
Base Counts Overall N 1005769482 0.68 % 497031785 0.68 % 508737697 0.69 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9955330482043786
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 469121360



Mapping Quality

Mapping Quality Histogram
HYHL2CCXY_1_2.mapq.png



Read Length

Read Length Reads
150 486873312
150 486873312



Insert Size Plot

Insert Size Histogram
HYHL2CCXY_1_2.isize.png