{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 166774972, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 160707473, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.36, 
            "paired": 166774972, 
            "paired_qc_failed": 0, 
            "read1": 83387486, 
            "read1_qc_failed": 0, 
            "read2": 83387486, 
            "read2_qc_failed": 0, 
            "paired_properly": 157864271, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 94.66, 
            "with_itself": 159240646, 
            "with_itself_qc_failed": 0, 
            "singletons": 1466827, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.88, 
            "diff_chroms": 133220, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 150105716, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 148174218, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.71, 
            "paired": 150105716, 
            "paired_qc_failed": 0, 
            "read1": 75052858, 
            "read1_qc_failed": 0, 
            "read2": 75052858, 
            "read2_qc_failed": 0, 
            "paired_properly": 145662973, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.04, 
            "with_itself": 147504283, 
            "with_itself_qc_failed": 0, 
            "singletons": 669935, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.45, 
            "diff_chroms": 160944, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 62117979, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 3914194, 
            "paired_opt_dupes": 3417, 
            "dupes_pct": 0.063012
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 63945512, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 447746, 
            "paired_opt_dupes": 2982, 
            "dupes_pct": 0.007002
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61949545, 
            "distinct_read_pairs": 58090083, 
            "one_read_pair": 54505149, 
            "two_read_pair": 3387761, 
            "NRF": 0.9377, 
            "PBC1": 0.938287, 
            "PBC2": 16.088841
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 63774698, 
            "distinct_read_pairs": 63378830, 
            "one_read_pair": 62997865, 
            "two_read_pair": 374780, 
            "NRF": 0.993793, 
            "PBC1": 0.993989, 
            "PBC2": 168.092921
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 116407570, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 116407570, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 116407570, 
            "paired_qc_failed": 0, 
            "read1": 58203785, 
            "read1_qc_failed": 0, 
            "read2": 58203785, 
            "read2_qc_failed": 0, 
            "paired_properly": 116407570, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 116407570, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 126995532, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126995532, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 126995532, 
            "paired_qc_failed": 0, 
            "read1": 63497766, 
            "read1_qc_failed": 0, 
            "read2": 63497766, 
            "read2_qc_failed": 0, 
            "paired_properly": 126995532, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 126995532, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 144966, 
        "Np": 0, 
        "N_opt": 144966, 
        "N_consv": 144966, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.180915693835172, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.2007258, 
            "argmin_corr": 1500, 
            "min_corr": 0.1738644, 
            "NSC": 1.040556, 
            "RSC": 0.2625054
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.248836823895
        }, 
        "rep1-pr1": {
            "FRiP": 0.206444779579
        }, 
        "rep1-pr2": {
            "FRiP": 0.206110712248
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.170312288744
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.286785048519, 
            "auc": 0.496231309464, 
            "ch_div": 0.0962147853885, 
            "elbow_pt": 0.0, 
            "jsd": 0.615064886252, 
            "syn_auc": 0.503370617288, 
            "syn_elbow_pt": 0.132607114382, 
            "syn_jsd": 0.270766433895
        }
    ]
}