/CEMT/B35055_1_lane_gembs

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SAMPLE B35055_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1007019138 100.00 % 503509569 100.00 % 503509569 100.00 %
General Reads 989659854 98.28 % 496786091 98.66 % 492873763 97.89 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 9974048 0.99 % 5004507 0.99 % 4969541 0.99 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7385236 0.73 % 1718971 0.34 % 5666265 1.13 %
Bisulfite_reads C2T 509196087 50.56 % 255451219 50.73 % 253744868 50.40 %
Bisulfite_reads G2A 490437815 48.70 % 246339379 48.92 % 244098436 48.48 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 441078341
Average Unique 87.60 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59510982680 39.14 % 23882036158 31.41 % 35628946522 46.86 %
Base Counts Overall C 15952713352 10.49 % 614925372 0.81 % 15337787980 20.17 %
Base Counts Overall G 15792497186 10.39 % 15197631185 19.99 % 594866001 0.78 %
Base Counts Overall T 59770362858 39.31 % 35821784838 47.12 % 23948578020 31.50 %
Base Counts Overall N 1033333762 0.68 % 513567366 0.68 % 519766396 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9955326679693608
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 487379812



Mapping Quality

Mapping Quality Histogram
B35055_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B35055_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H2FWFCCX2_2_2