{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 138607382, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 136652294, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.59, 
            "paired": 138607382, 
            "paired_qc_failed": 0, 
            "read1": 69303691, 
            "read1_qc_failed": 0, 
            "read2": 69303691, 
            "read2_qc_failed": 0, 
            "paired_properly": 135124557, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 97.49, 
            "with_itself": 135841445, 
            "with_itself_qc_failed": 0, 
            "singletons": 810849, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.58, 
            "diff_chroms": 99487, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 146003154, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 143950255, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.59, 
            "paired": 146003154, 
            "paired_qc_failed": 0, 
            "read1": 73001577, 
            "read1_qc_failed": 0, 
            "read2": 73001577, 
            "read2_qc_failed": 0, 
            "paired_properly": 139355986, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.45, 
            "with_itself": 143134940, 
            "with_itself_qc_failed": 0, 
            "singletons": 815315, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.56, 
            "diff_chroms": 200467, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 58961348, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 839815, 
            "paired_opt_dupes": 4394, 
            "dupes_pct": 0.014243
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 61294235, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 434896, 
            "paired_opt_dupes": 3707, 
            "dupes_pct": 0.007095
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 58865782, 
            "distinct_read_pairs": 58047543, 
            "one_read_pair": 57250314, 
            "two_read_pair": 783615, 
            "NRF": 0.9861, 
            "PBC1": 0.986266, 
            "PBC2": 73.059237
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 61180783, 
            "distinct_read_pairs": 60780225, 
            "one_read_pair": 60396899, 
            "two_read_pair": 377062, 
            "NRF": 0.993453, 
            "PBC1": 0.993693, 
            "PBC2": 160.177634
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 116243066, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 116243066, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 116243066, 
            "paired_qc_failed": 0, 
            "read1": 58121533, 
            "read1_qc_failed": 0, 
            "read2": 58121533, 
            "read2_qc_failed": 0, 
            "paired_properly": 116243066, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 116243066, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 121718678, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 121718678, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 121718678, 
            "paired_qc_failed": 0, 
            "read1": 60859339, 
            "read1_qc_failed": 0, 
            "read2": 60859339, 
            "read2_qc_failed": 0, 
            "paired_properly": 121718678, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 121718678, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 113880, 
        "Np": 0, 
        "N_opt": 113880, 
        "N_consv": 113880, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": -10, 
            "corr_est_frag_len": 0.179569792086902, 
            "phantom_peak": 50, 
            "corr_phantom_peak": 0.1858613, 
            "argmin_corr": 1500, 
            "min_corr": 0.1746059, 
            "NSC": 1.028429, 
            "RSC": 0.4410234
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.199758713302
        }, 
        "rep1-pr1": {
            "FRiP": 0.155749655834
        }, 
        "rep1-pr2": {
            "FRiP": 0.155457021763
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0980405837332
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.288074085223, 
            "auc": 0.496228593205, 
            "ch_div": 0.0995923459402, 
            "elbow_pt": 0.0, 
            "jsd": 0.568864346564, 
            "syn_auc": 0.503921163996, 
            "syn_elbow_pt": 0.117899593198, 
            "syn_jsd": 0.268573502599
        }
    ]
}