/CEMT/A95341_2_lane_gembs

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SAMPLE A95341_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2005240506 100.00 % 1002620253 100.00 % 1002620253 100.00 %
General Reads 1988252245 99.15 % 997257851 99.47 % 990994394 98.84 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 3114890 0.16 % 1561068 0.16 % 1553822 0.15 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 13873371 0.69 % 3801334 0.38 % 10072037 1.00 %
Bisulfite_reads C2T 1016527572 50.69 % 509568158 50.82 % 506959414 50.56 %
Bisulfite_reads G2A 974839563 48.61 % 489250761 48.80 % 485588802 48.43 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 866687431
Average Unique 86.44 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 117584321026 38.83 % 50906521132 33.62 % 66677799894 44.04 %
Base Counts Overall C 32612326815 10.77 % 1520202399 1.00 % 31092124416 20.54 %
Base Counts Overall G 32591910188 10.76 % 31037711742 20.50 % 1554198446 1.03 %
Base Counts Overall T 117943423652 38.95 % 66914109383 44.20 % 51029314269 33.71 %
Base Counts Overall N 2059334725 0.68 % 1017113547 0.67 % 1042221178 0.69 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9965640088441674
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 965493211



Mapping Quality

Mapping Quality Histogram
A95341_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95341_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYHL2CCXY_5_2
HYHL2CCXY_6_2