/CEMT/A95342_2_lane_gembs/HYHL2CCXY_7_2

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SAMPLE A95342_2_lane_gembs LANE HYHL2CCXY_7_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 962219540 100.00 % 481109770 100.00 % 481109770 100.00 %
General Reads 954700387 99.22 % 478789604 99.52 % 475910783 98.92 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 272771 0.03 % 136760 0.03 % 136011 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7246382 0.75 % 2183406 0.45 % 5062976 1.05 %
Bisulfite_reads C2T 492277623 51.16 % 246719643 51.28 % 245557980 51.04 %
Bisulfite_reads G2A 462695535 48.09 % 232206721 48.26 % 230488814 47.91 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 404124879
Average Unique 84.00 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 54661991478 37.62 % 22997517606 31.66 % 31664473872 43.59 %
Base Counts Overall C 17457318666 12.02 % 789691251 1.09 % 16667627415 22.94 %
Base Counts Overall G 17352848775 11.94 % 16566651960 22.80 % 786196815 1.08 %
Base Counts Overall T 54839721253 37.74 % 31807266485 43.78 % 23032454768 31.70 %
Base Counts Overall N 983270368 0.68 % 486447968 0.67 % 496822400 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9958972969703489
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 459850315



Mapping Quality

Mapping Quality Histogram
HYHL2CCXY_7_2.mapq.png



Read Length

Read Length Reads
150 481109770
150 481109770



Insert Size Plot

Insert Size Histogram
HYHL2CCXY_7_2.isize.png