{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 53802814, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51818958, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.31, 
            "paired": 53802814, 
            "paired_qc_failed": 0, 
            "read1": 26901407, 
            "read1_qc_failed": 0, 
            "read2": 26901407, 
            "read2_qc_failed": 0, 
            "paired_properly": 51399758, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 95.53, 
            "with_itself": 51600816, 
            "with_itself_qc_failed": 0, 
            "singletons": 218142, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.41, 
            "diff_chroms": 19305, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 136919114, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 134757903, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.42, 
            "paired": 136919114, 
            "paired_qc_failed": 0, 
            "read1": 68459557, 
            "read1_qc_failed": 0, 
            "read2": 68459557, 
            "read2_qc_failed": 0, 
            "paired_properly": 131935292, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 96.36, 
            "with_itself": 133937802, 
            "with_itself_qc_failed": 0, 
            "singletons": 820101, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.6, 
            "diff_chroms": 184333, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 24123487, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 2537348, 
            "paired_opt_dupes": 19353, 
            "dupes_pct": 0.105182
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 0, 
            "paired_reads": 57012328, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 0, 
            "paired_dupes": 408353, 
            "paired_opt_dupes": 8386, 
            "dupes_pct": 0.007163
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24120285, 
            "distinct_read_pairs": 21583223, 
            "one_read_pair": 19456841, 
            "two_read_pair": 1867101, 
            "NRF": 0.894816, 
            "PBC1": 0.90148, 
            "PBC2": 10.420883
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 56995712, 
            "distinct_read_pairs": 56588428, 
            "one_read_pair": 56205893, 
            "two_read_pair": 372834, 
            "NRF": 0.992854, 
            "PBC1": 0.99324, 
            "PBC2": 150.753131
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 43172278, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43172278, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 43172278, 
            "paired_qc_failed": 0, 
            "read1": 21586139, 
            "read1_qc_failed": 0, 
            "read2": 21586139, 
            "read2_qc_failed": 0, 
            "paired_properly": 43172278, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 43172278, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 113207950, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 113207950, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 113207950, 
            "paired_qc_failed": 0, 
            "read1": 56603975, 
            "read1_qc_failed": 0, 
            "read2": 56603975, 
            "read2_qc_failed": 0, 
            "paired_properly": 113207950, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 100.0, 
            "with_itself": 113207950, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 92810, 
        "Np": 0, 
        "N_opt": 92810, 
        "N_consv": 92810, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 145, 
            "corr_est_frag_len": 0.348188166476958, 
            "phantom_peak": 55, 
            "corr_phantom_peak": 0.2426892, 
            "argmin_corr": 1500, 
            "min_corr": 0.1496381, 
            "NSC": 2.326869, 
            "RSC": 2.133775
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.673426523303
        }, 
        "rep1-pr1": {
            "FRiP": 0.665017237462
        }, 
        "rep1-pr2": {
            "FRiP": 0.665208265457
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.646106809622
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0768357303782, 
            "auc": 0.493587091412, 
            "ch_div": 0.351219834023, 
            "elbow_pt": 2.5943107656e-208, 
            "jsd": 0.878052583913, 
            "syn_auc": 0.509024182077, 
            "syn_elbow_pt": 0.513562856627, 
            "syn_jsd": 0.618859251895
        }
    ]
}