/CEMT/B33201_1_lane_gembs

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SAMPLE B33201_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 953605644 100.00 % 476802822 100.00 % 476802822 100.00 %
General Reads 935997084 98.15 % 471450402 98.88 % 464546682 97.43 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 7548405 0.79 % 3793201 0.80 % 3755204 0.79 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 10060155 1.05 % 1559219 0.33 % 8500936 1.78 %
Bisulfite_reads C2T 479613664 50.29 % 241412400 50.63 % 238201264 49.96 %
Bisulfite_reads G2A 463931825 48.65 % 233831203 49.04 % 230100622 48.26 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 408787084
Average Unique 85.74 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 56424210549 39.18 % 24564348665 34.12 % 31859861884 44.25 %
Base Counts Overall C 14895928657 10.34 % 583969819 0.81 % 14311958838 19.88 %
Base Counts Overall G 15101212513 10.49 % 14403084162 20.01 % 698128351 0.97 %
Base Counts Overall T 56594359013 39.30 % 31958668954 44.39 % 24635690059 34.22 %
Base Counts Overall N 978741512 0.68 % 487154522 0.68 % 491586990 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9933811006247997
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 453452801



Mapping Quality

Mapping Quality Histogram
B33201_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B33201_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
H752JCCX2_1_2