/cemt/K005720_0_lane_gembs

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SAMPLE K005720_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1405365828 100.00 % 702682914 100.00 % 702682914 100.00 %
General Reads 1381642284 98.31 % 692215973 98.51 % 689426311 98.11 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 4460339 0.32 % 2238844 0.32 % 2221495 0.32 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 19263205 1.37 % 8228097 1.17 % 11035108 1.57 %
Bisulfite_reads C2T 703111061 50.03 % 352192033 50.12 % 350919028 49.94 %
Bisulfite_reads G2A 682991562 48.60 % 342262784 48.71 % 340728778 48.49 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 484680822
Average Unique 68.98 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 81876712987 38.58 % 32612895850 30.74 % 49263817137 46.43 %
Base Counts Overall C 22872499529 10.78 % 1622664293 1.53 % 21249835236 20.03 %
Base Counts Overall G 23322661025 10.99 % 21416784630 20.18 % 1905876395 1.80 %
Base Counts Overall T 82708660729 38.97 % 49738943261 46.88 % 32969717468 31.07 %
Base Counts Overall N 1429705758 0.67 % 713831980 0.67 % 715873778 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.985473449996927
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 540365047



Mapping Quality

Mapping Quality Histogram
K005720_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005720_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF230TGB_150bp_chastity