{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 149797762, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147736236, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.62, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 115110378, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 107905177, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 93.74, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 104093455, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6476576, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.062219
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 81980163, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 28063216, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.342317
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 104090550, 
            "distinct_read_pairs": 99085937, 
            "one_read_pair": 94430351, 
            "two_read_pair": 4397587, 
            "NRF": 0.951921, 
            "PBC1": 0.953015, 
            "PBC2": 21.47322
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 81744465, 
            "distinct_read_pairs": 54640360, 
            "one_read_pair": 37409513, 
            "two_read_pair": 10587404, 
            "NRF": 0.668429, 
            "PBC1": 0.68465, 
            "PBC2": 3.533398
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 97616879, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 97616879, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 53916947, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53916947, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 23774, 
        "Np": 0, 
        "N_opt": 23774, 
        "N_consv": 23774, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 80, 
            "corr_est_frag_len": 0.189771362799767, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2171919, 
            "argmin_corr": 1500, 
            "min_corr": 0.1834522, 
            "NSC": 1.034446, 
            "RSC": 0.187293
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0131512451897
        }, 
        "rep1-pr1": {
            "FRiP": 0.0316035476866
        }, 
        "rep1-pr2": {
            "FRiP": 0.0314591845091
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00834527802601
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.310135353206, 
            "auc": 0.494056846659, 
            "ch_div": 0.110586631159, 
            "elbow_pt": 8.75532735738e-243, 
            "jsd": 0.520682636981, 
            "syn_auc": 0.499527825122, 
            "syn_elbow_pt": 0.0173888127605, 
            "syn_jsd": 0.222795568819
        }
    ]
}
