/EXTERNAL ENCODE/K005732_K005718_2_lane_gembs/ENCFF510CJF_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1717547200 | 100.00 % | 858773600 | 100.00 % | 858773600 | 100.00 % |
| General Reads | 1689972247 | 98.39 % | 851754543 | 99.18 % | 838217704 | 97.61 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2211673 | 0.13 % | 1114161 | 0.13 % | 1097512 | 0.13 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 25363280 | 1.48 % | 5904896 | 0.69 % | 19458384 | 2.27 % |
| Bisulfite_reads C2T | 857941831 | 49.95 % | 432103615 | 50.32 % | 425838216 | 49.59 % |
| Bisulfite_reads G2A | 834242089 | 48.57 % | 420765089 | 49.00 % | 413477000 | 48.15 % |
| Concept | Value |
|---|---|
| Unique Fragments | 586557590 |
| Average Unique | 68.30 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 99997419669 | 38.56 % | 44456037115 | 34.28 % | 55541382554 | 42.83 % |
| Base Counts Overall C | 28258629898 | 10.90 % | 1634754238 | 1.26 % | 26623875660 | 20.53 % |
| Base Counts Overall G | 27868367155 | 10.75 % | 25895139506 | 19.97 % | 1973227649 | 1.52 % |
| Base Counts Overall T | 101463976864 | 39.12 % | 56812512481 | 43.81 % | 44651464383 | 34.43 % |
| Base Counts Overall N | 1761233614 | 0.68 % | 876370260 | 0.68 % | 884863354 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9883639234528515 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 650734223 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 858773600 |
| 150 | 858773600 |
| Insert Size Histogram |
|---|
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