/EXTERNAL ENCODE/K005732_K005718_2_lane_gembs/ENCFF768ZOC_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1876951672 | 100.00 % | 938475836 | 100.00 % | 938475836 | 100.00 % |
| General Reads | 1845193200 | 98.31 % | 930692326 | 99.17 % | 914500874 | 97.45 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3332636 | 0.18 % | 1678754 | 0.18 % | 1653882 | 0.18 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 28425836 | 1.51 % | 6104756 | 0.65 % | 22321080 | 2.38 % |
| Bisulfite_reads C2T | 936997325 | 49.92 % | 472368022 | 50.33 % | 464629303 | 49.51 % |
| Bisulfite_reads G2A | 911528511 | 48.56 % | 460003058 | 49.02 % | 451525453 | 48.11 % |
| Concept | Value |
|---|---|
| Unique Fragments | 611258692 |
| Average Unique | 65.13 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 110278735357 | 38.91 % | 48684494571 | 34.36 % | 61594240786 | 43.47 % |
| Base Counts Overall C | 30290249525 | 10.69 % | 1847483669 | 1.30 % | 28442765856 | 20.07 % |
| Base Counts Overall G | 30684052609 | 10.83 % | 28174662790 | 19.88 % | 2509389819 | 1.77 % |
| Base Counts Overall T | 110247074590 | 38.90 % | 62051199426 | 43.79 % | 48195875164 | 34.01 % |
| Base Counts Overall N | 1919590391 | 0.68 % | 952010780 | 0.67 % | 967579611 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9902426776858745 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 680090367 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 938475836 |
| 150 | 938475836 |
| Insert Size Histogram |
|---|
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