{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 211218068, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 207818435, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.39, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 74635885, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 73218299, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 195217021, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 77799493, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.398528
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 64434535, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 18683129, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.289955
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 195006006, 
            "distinct_read_pairs": 117702370, 
            "one_read_pair": 79825013, 
            "two_read_pair": 20496966, 
            "NRF": 0.603583, 
            "PBC1": 0.678194, 
            "PBC2": 3.894479
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 64010673, 
            "distinct_read_pairs": 45807305, 
            "one_read_pair": 32049664, 
            "two_read_pair": 10312923, 
            "NRF": 0.71562, 
            "PBC1": 0.699663, 
            "PBC2": 3.107719
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 117417528, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117417528, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 45751406, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 45751406, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 88565, 
        "Np": 0, 
        "N_opt": 88565, 
        "N_consv": 88565, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.253770763469384, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2397962, 
            "argmin_corr": 1500, 
            "min_corr": 0.2030956, 
            "NSC": 1.249514, 
            "RSC": 1.380771
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.52743255525
        }, 
        "rep1-pr1": {
            "FRiP": 0.532090232119
        }, 
        "rep1-pr2": {
            "FRiP": 0.531909655098
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.520291261503
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.151963887927, 
            "auc": 0.496247921059, 
            "ch_div": 0.102894899938, 
            "elbow_pt": 0.0, 
            "jsd": 0.842365900958, 
            "syn_auc": 0.49810951733, 
            "syn_elbow_pt": 0.417692590122, 
            "syn_jsd": 0.523501085539
        }
    ]
}
