{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 77205996, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75294105, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 163100892, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 159905203, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 61031112, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7031644, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.115214
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 141438567, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 81591409, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.576868
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 61023732, 
            "distinct_read_pairs": 54020654, 
            "one_read_pair": 48479839, 
            "two_read_pair": 4425811, 
            "NRF": 0.88524, 
            "PBC1": 0.897432, 
            "PBC2": 10.953888
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 140155811, 
            "distinct_read_pairs": 60274663, 
            "one_read_pair": 24782417, 
            "two_read_pair": 14626059, 
            "NRF": 0.430055, 
            "PBC1": 0.411158, 
            "PBC2": 1.694402
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 53999468, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 53999468, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 59847158, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 59847158, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 65726, 
        "Np": 0, 
        "N_opt": 65726, 
        "N_consv": 65726, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.272772933392198, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2671383, 
            "argmin_corr": 1500, 
            "min_corr": 0.1999578, 
            "NSC": 1.364152, 
            "RSC": 1.083874
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.449888180392
        }, 
        "rep1-pr1": {
            "FRiP": 0.43261912948
        }, 
        "rep1-pr2": {
            "FRiP": 0.432462260512
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.42891513274
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.162515113333, 
            "auc": 0.492027329163, 
            "ch_div": 0.147129621855, 
            "elbow_pt": 2.83538568947e-134, 
            "jsd": 0.820863772497, 
            "syn_auc": 0.509291399423, 
            "syn_elbow_pt": 0.396896925862, 
            "syn_jsd": 0.491800061244
        }
    ]
}
