{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 77790920, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 76269663, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 164404035, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 158666266, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.51, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 66270996, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2535135, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.038254
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 140271450, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13655025, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.097347
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 66168121, 
            "distinct_read_pairs": 63729779, 
            "one_read_pair": 61521150, 
            "two_read_pair": 2128514, 
            "NRF": 0.963149, 
            "PBC1": 0.965344, 
            "PBC2": 28.903333
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 137519456, 
            "distinct_read_pairs": 126616772, 
            "one_read_pair": 116960571, 
            "two_read_pair": 8773536, 
            "NRF": 0.920719, 
            "PBC1": 0.923737, 
            "PBC2": 13.331064
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 63735861, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 63735861, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 126616425, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126616425, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 40501, 
        "Np": 0, 
        "N_opt": 40501, 
        "N_consv": 40501, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.178678618505225, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1917228, 
            "argmin_corr": 1500, 
            "min_corr": 0.1752795, 
            "NSC": 1.019392, 
            "RSC": 0.2067162
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0948607057175
        }, 
        "rep1-pr1": {
            "FRiP": 0.0863408055525
        }, 
        "rep1-pr2": {
            "FRiP": 0.0864999880089
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0523446311452
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.3169594257, 
            "auc": 0.494904535352, 
            "ch_div": 0.101686342326, 
            "elbow_pt": 0.0, 
            "jsd": 0.534157678505, 
            "syn_auc": 0.495511464725, 
            "syn_elbow_pt": 0.0676630865496, 
            "syn_jsd": 0.217641409009
        }
    ]
}
