{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 65189580, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64193703, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.47, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 164404035, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 158666266, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.51, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 59171495, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7172589, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.121217
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 140271450, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 13655025, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.097347
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 59062337, 
            "distinct_read_pairs": 52022161, 
            "one_read_pair": 45743908, 
            "two_read_pair": 5647048, 
            "NRF": 0.880801, 
            "PBC1": 0.879316, 
            "PBC2": 8.100499
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 137519456, 
            "distinct_read_pairs": 126616772, 
            "one_read_pair": 116960571, 
            "two_read_pair": 8773536, 
            "NRF": 0.920719, 
            "PBC1": 0.923737, 
            "PBC2": 13.331064
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 51998906, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 51998906, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 126616425, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 126616425, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 94905, 
        "Np": 0, 
        "N_opt": 94905, 
        "N_consv": 94905, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.172958807773058, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1773782, 
            "argmin_corr": 1500, 
            "min_corr": 0.1682271, 
            "NSC": 1.028127, 
            "RSC": 0.5170679
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.25410305566
        }, 
        "rep1-pr1": {
            "FRiP": 0.206273199152
        }, 
        "rep1-pr2": {
            "FRiP": 0.20574242711
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.192194003222
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247449756701, 
            "auc": 0.494360844322, 
            "ch_div": 0.110482911664, 
            "elbow_pt": 7.46766804421e-270, 
            "jsd": 0.689595057927, 
            "syn_auc": 0.508578448322, 
            "syn_elbow_pt": 0.193530414156, 
            "syn_jsd": 0.327595276172
        }
    ]
}