{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 84486230, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 81550713, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.53, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 124772893, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122648601, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.3, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 67180753, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2236120, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.033285
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 109136625, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4002951, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.036678
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 67168874, 
            "distinct_read_pairs": 64948790, 
            "one_read_pair": 63063203, 
            "two_read_pair": 1817004, 
            "NRF": 0.966948, 
            "PBC1": 0.970968, 
            "PBC2": 34.707245
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 108762827, 
            "distinct_read_pairs": 105129453, 
            "one_read_pair": 101770103, 
            "two_read_pair": 3247963, 
            "NRF": 0.966594, 
            "PBC1": 0.968046, 
            "PBC2": 31.333517
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 64944633, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64944633, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 105133674, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 105133674, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 21012, 
        "Np": 0, 
        "N_opt": 21012, 
        "N_consv": 21012, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.179005736129712, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.2019509, 
            "argmin_corr": 1500, 
            "min_corr": 0.1743851, 
            "NSC": 1.026496, 
            "RSC": 0.1676203
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0541325350542
        }, 
        "rep1-pr1": {
            "FRiP": 0.0399409794386
        }, 
        "rep1-pr2": {
            "FRiP": 0.0401600578736
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0202349349659
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.331182468889, 
            "auc": 0.494953050244, 
            "ch_div": 0.100385258995, 
            "elbow_pt": 0.0, 
            "jsd": 0.51567926139, 
            "syn_auc": 0.498107274713, 
            "syn_elbow_pt": 0.0611808420416, 
            "syn_jsd": 0.193172802971
        }
    ]
}
