/EXTERNAL ENCODE/K005734_K005709_2_lane_gembs/ENCFF457XMZ_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1802222270 | 100.00 % | 901111135 | 100.00 % | 901111135 | 100.00 % |
| General Reads | 1779300505 | 98.73 % | 893357269 | 99.14 % | 885943236 | 98.32 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3900323 | 0.22 % | 1960700 | 0.22 % | 1939623 | 0.22 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 19021442 | 1.06 % | 5793166 | 0.64 % | 13228276 | 1.47 % |
| Bisulfite_reads C2T | 904842044 | 50.21 % | 454111318 | 50.39 % | 450730726 | 50.02 % |
| Bisulfite_reads G2A | 878358784 | 48.74 % | 441206651 | 48.96 % | 437152133 | 48.51 % |
| Concept | Value |
|---|---|
| Unique Fragments | 688404732 |
| Average Unique | 76.40 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 106312956428 | 39.07 % | 45808892939 | 33.67 % | 60504063489 | 44.47 % |
| Base Counts Overall C | 28462347847 | 10.46 % | 1505665977 | 1.11 % | 26956681870 | 19.81 % |
| Base Counts Overall G | 29175490818 | 10.72 % | 27221495426 | 20.01 % | 1953995392 | 1.44 % |
| Base Counts Overall T | 106353978839 | 39.08 % | 60618159704 | 44.55 % | 45735819135 | 33.61 % |
| Base Counts Overall N | 1830788838 | 0.67 % | 913567339 | 0.67 % | 917221499 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9923636983918331 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 761307741 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 901111135 |
| 150 | 901111135 |
| Insert Size Histogram |
|---|
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