/EXTERNAL ENCODE/K005734_K005709_2_lane_gembs/ENCFF799UTJ_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1829809964 | 100.00 % | 914904982 | 100.00 % | 914904982 | 100.00 % |
| General Reads | 1796457279 | 98.18 % | 906875416 | 99.12 % | 889581863 | 97.23 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3159323 | 0.17 % | 1594937 | 0.17 % | 1564386 | 0.17 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 30193362 | 1.65 % | 6434629 | 0.70 % | 23758733 | 2.60 % |
| Bisulfite_reads C2T | 912229773 | 49.85 % | 460289346 | 50.31 % | 451940427 | 49.40 % |
| Bisulfite_reads G2A | 887386829 | 48.50 % | 448181007 | 48.99 % | 439205822 | 48.01 % |
| Concept | Value |
|---|---|
| Unique Fragments | 640863269 |
| Average Unique | 70.05 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 107757814818 | 39.00 % | 46546457763 | 33.69 % | 61211357055 | 44.31 % |
| Base Counts Overall C | 28733959289 | 10.40 % | 1771589960 | 1.28 % | 26962369329 | 19.52 % |
| Base Counts Overall G | 29949523838 | 10.84 % | 27427662559 | 19.85 % | 2521861279 | 1.83 % |
| Base Counts Overall T | 107999530901 | 39.09 % | 61475010139 | 44.50 % | 46524520762 | 33.68 % |
| Base Counts Overall N | 1860475718 | 0.67 % | 929931861 | 0.67 % | 930543857 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9895231811202254 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 711039497 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 914904982 |
| 150 | 914904982 |
| Insert Size Histogram |
|---|
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