{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 88822220, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86305948, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.17, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 108812823, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 103478024, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.1, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 74026728, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7744466, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.104617
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 89388105, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12071558, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.135047
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 73986522, 
            "distinct_read_pairs": 66304136, 
            "one_read_pair": 59660228, 
            "two_read_pair": 6015104, 
            "NRF": 0.896165, 
            "PBC1": 0.899796, 
            "PBC2": 9.918403
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 85877955, 
            "distinct_read_pairs": 77318509, 
            "one_read_pair": 70095902, 
            "two_read_pair": 6317287, 
            "NRF": 0.90033, 
            "PBC1": 0.906586, 
            "PBC2": 11.095887
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 66282262, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 66282262, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 77316547, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 77316547, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 34289, 
        "Np": 0, 
        "N_opt": 34289, 
        "N_consv": 34289, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 220, 
            "corr_est_frag_len": 0.182131934703355, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1975671, 
            "argmin_corr": 1500, 
            "min_corr": 0.1700042, 
            "NSC": 1.071338, 
            "RSC": 0.4400021
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.15192989165
        }, 
        "rep1-pr1": {
            "FRiP": 0.141826814393
        }, 
        "rep1-pr2": {
            "FRiP": 0.141628036338
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.135289684457
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.290271035876, 
            "auc": 0.49500507147, 
            "ch_div": 0.0975472731708, 
            "elbow_pt": 0.0, 
            "jsd": 0.609840896641, 
            "syn_auc": 0.507490426274, 
            "syn_elbow_pt": 0.152450012145, 
            "syn_jsd": 0.28144248072
        }
    ]
}