/cemt/K005714_0_lane_gembs

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SAMPLE K005714_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1820038046 100.00 % 910019023 100.00 % 910019023 100.00 %
General Reads 1775457453 97.55 % 891841361 98.00 % 883616092 97.10 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 5046918 0.28 % 2537147 0.28 % 2509771 0.28 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 39533675 2.17 % 15640515 1.72 % 23893160 2.63 %
Bisulfite_reads C2T 905908322 49.77 % 454853547 49.98 % 451054775 49.57 %
Bisulfite_reads G2A 874596049 48.05 % 439524961 48.30 % 435071088 47.81 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 565875366
Average Unique 62.18 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 106242436340 38.66 % 47269329137 34.40 % 58973107203 42.92 %
Base Counts Overall C 30245621981 11.01 % 2886342532 2.10 % 27359279449 19.91 %
Base Counts Overall G 31132448614 11.33 % 27523826945 20.03 % 3608621669 2.63 %
Base Counts Overall T 105353406336 38.33 % 58811251531 42.80 % 46542154805 33.87 %
Base Counts Overall N 1851831675 0.67 % 922122328 0.67 % 929709347 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9909015457707868
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 636221060



Mapping Quality

Mapping Quality Histogram
K005714_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005714_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF288SYU_150bp_chastity