{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32093712, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 29538057, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 92.04, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 18445842, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 18116675, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.22, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25745430, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5978006, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.232197
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 13277223, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 196144, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.014773
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 25743303, 
            "distinct_read_pairs": 19780904, 
            "one_read_pair": 15587010, 
            "two_read_pair": 2934985, 
            "NRF": 0.76839, 
            "PBC1": 0.787983, 
            "PBC2": 5.310763
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 13240879, 
            "distinct_read_pairs": 13071124, 
            "one_read_pair": 12904651, 
            "two_read_pair": 164134, 
            "NRF": 0.987179, 
            "PBC1": 0.987264, 
            "PBC2": 78.622656
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19767424, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19767424, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 13081079, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 13081079, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 22841, 
        "Np": 0, 
        "N_opt": 22841, 
        "N_consv": 22841, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 170, 
            "corr_est_frag_len": 0.595746146430395, 
            "phantom_peak": 40, 
            "corr_phantom_peak": 0.5022013, 
            "argmin_corr": 1500, 
            "min_corr": 0.1619428, 
            "NSC": 3.678745, 
            "RSC": 1.274923
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.71596054884
        }, 
        "rep1-pr1": {
            "FRiP": 0.718568413392
        }, 
        "rep1-pr2": {
            "FRiP": 0.718105765421
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.7148030389
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.0560443534345, 
            "auc": 0.486790434428, 
            "ch_div": 0.456902997757, 
            "elbow_pt": 3.03216505726e-48, 
            "jsd": 0.954257918244, 
            "syn_auc": 0.51886541695, 
            "syn_elbow_pt": 0.616393097638, 
            "syn_jsd": 0.683287055385
        }
    ]
}