{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 32238523, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 31427219, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.48, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 41260935, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 40414875, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.95, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 27308473, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 350180, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.012823
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 35127815, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 490414, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.013961
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 27303280, 
            "distinct_read_pairs": 26955483, 
            "one_read_pair": 26649975, 
            "two_read_pair": 296692, 
            "NRF": 0.987262, 
            "PBC1": 0.988666, 
            "PBC2": 89.823706
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 35086190, 
            "distinct_read_pairs": 34622097, 
            "one_read_pair": 34212145, 
            "two_read_pair": 398872, 
            "NRF": 0.986773, 
            "PBC1": 0.988159, 
            "PBC2": 85.77224
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 26958293, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 26958293, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 34637401, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 34637401, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 15605, 
        "Np": 0, 
        "N_opt": 15605, 
        "N_consv": 15605, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 215, 
            "corr_est_frag_len": 0.177342538942523, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1935874, 
            "argmin_corr": 1500, 
            "min_corr": 0.1721716, 
            "NSC": 1.030033, 
            "RSC": 0.2414534
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0410941588828
        }, 
        "rep1-pr1": {
            "FRiP": 0.0443518464311
        }, 
        "rep1-pr2": {
            "FRiP": 0.044274974102
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0316945132227
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.305003241708, 
            "auc": 0.492172497104, 
            "ch_div": 0.115975640477, 
            "elbow_pt": 2.44633161053e-139, 
            "jsd": 0.536797194576, 
            "syn_auc": 0.493696796062, 
            "syn_elbow_pt": 0.056787476796, 
            "syn_jsd": 0.223140665258
        }
    ]
}
