{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 72603190, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 68283132, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 94.05, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 231311031, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 205453694, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.82, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 53879979, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3725120, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.069137
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 179775844, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 9876653, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.054939
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 53850686, 
            "distinct_read_pairs": 50160967, 
            "one_read_pair": 46947862, 
            "two_read_pair": 3002908, 
            "NRF": 0.931482, 
            "PBC1": 0.935944, 
            "PBC2": 15.634133
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 178939245, 
            "distinct_read_pairs": 169942979, 
            "one_read_pair": 161641688, 
            "two_read_pair": 7882680, 
            "NRF": 0.949724, 
            "PBC1": 0.951152, 
            "PBC2": 20.50593
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 50154859, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 50154859, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 169899191, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 169899191, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 41850, 
        "Np": 0, 
        "N_opt": 41850, 
        "N_consv": 41850, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.179716499919017, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.2078839, 
            "argmin_corr": 1500, 
            "min_corr": 0.1740652, 
            "NSC": 1.032467, 
            "RSC": 0.1671059
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.111733137948
        }, 
        "rep1-pr1": {
            "FRiP": 0.0851211358095
        }, 
        "rep1-pr2": {
            "FRiP": 0.0852073783012
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0686324380297
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.315887382933, 
            "auc": 0.494255531165, 
            "ch_div": 0.101888097628, 
            "elbow_pt": 5.38452262691e-260, 
            "jsd": 0.564627958399, 
            "syn_auc": 0.504447825061, 
            "syn_elbow_pt": 0.0850871018617, 
            "syn_jsd": 0.217663292421
        }
    ]
}