{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 124885241, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 122245397, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.89, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 180623455, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 175260649, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.03, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 112832979, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 20496108, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.18165
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 153451463, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5992553, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.039052
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 112802918, 
            "distinct_read_pairs": 94367211, 
            "one_read_pair": 82283973, 
            "two_read_pair": 8512884, 
            "NRF": 0.836567, 
            "PBC1": 0.871955, 
            "PBC2": 9.665816
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 153356465, 
            "distinct_read_pairs": 147911233, 
            "one_read_pair": 143045976, 
            "two_read_pair": 4650830, 
            "NRF": 0.964493, 
            "PBC1": 0.967107, 
            "PBC2": 30.757086
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 92336871, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92336871, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 147458910, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 147458910, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 71940, 
        "Np": 0, 
        "N_opt": 71940, 
        "N_consv": 71940, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 250, 
            "corr_est_frag_len": 0.321488579413355, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2934282, 
            "argmin_corr": 1500, 
            "min_corr": 0.1948503, 
            "NSC": 1.649926, 
            "RSC": 1.284651
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.473215654191
        }, 
        "rep1-pr1": {
            "FRiP": 0.456064762667
        }, 
        "rep1-pr2": {
            "FRiP": 0.456092838592
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.457796761282
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.193966812896, 
            "auc": 0.495751476328, 
            "ch_div": 0.100483203819, 
            "elbow_pt": 0.0, 
            "jsd": 0.843401578959, 
            "syn_auc": 0.5033931202, 
            "syn_elbow_pt": 0.400993381736, 
            "syn_jsd": 0.460463015953
        }
    ]
}