/cemt/K005717_0_lane_gembs

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SAMPLE K005717_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1671296522 100.00 % 835648261 100.00 % 835648261 100.00 %
General Reads 1646576178 98.52 % 825305660 98.76 % 821270518 98.28 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 9019994 0.54 % 4524941 0.54 % 4495053 0.54 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 15700350 0.94 % 5817660 0.70 % 9882690 1.18 %
Bisulfite_reads C2T 843311990 50.46 % 422631656 50.58 % 420680334 50.34 %
Bisulfite_reads G2A 812284182 48.60 % 407198945 48.73 % 405085237 48.48 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 632630077
Average Unique 75.71 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 98823258241 39.16 % 42564968639 33.73 % 56258289602 44.58 %
Base Counts Overall C 26411626181 10.47 % 1366307406 1.08 % 25045318775 19.85 %
Base Counts Overall G 26997742333 10.70 % 25304094722 20.05 % 1693647611 1.34 %
Base Counts Overall T 98414632627 39.00 % 56084939713 44.45 % 42329692914 33.55 %
Base Counts Overall N 1718515440 0.68 % 862576931 0.68 % 855938509 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9933527455111074
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 703371451



Mapping Quality

Mapping Quality Histogram
K005717_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005717_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF535VCB_150bp_chastity