/cemt/K005727_0_lane_gembs

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SAMPLE K005727_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1824371028 100.00 % 912185514 100.00 % 912185514 100.00 %
General Reads 1748179927 95.82 % 889551762 97.52 % 858628165 94.13 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 13833171 0.76 % 7044947 0.77 % 6788224 0.74 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 62357930 3.42 % 15588805 1.71 % 46769125 5.13 %
Bisulfite_reads C2T 890260780 48.80 % 452765981 49.64 % 437494799 47.96 %
Bisulfite_reads G2A 871752318 47.78 % 443830728 48.66 % 427921590 46.91 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 520725687
Average Unique 57.09 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 105989993942 38.47 % 46331652820 33.64 % 59658341122 43.31 %
Base Counts Overall C 30635505773 11.12 % 3159938838 2.29 % 27475566935 19.95 %
Base Counts Overall G 31991577425 11.61 % 27651286478 20.07 % 4340290947 3.15 %
Base Counts Overall T 104991726164 38.11 % 59667129462 43.32 % 45324596702 32.91 %
Base Counts Overall N 1871221924 0.68 % 930005016 0.68 % 941216908 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9876515531493169
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 583633356



Mapping Quality

Mapping Quality Histogram
K005727_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005727_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF287MIO_150bp_chastity