/EXTERNAL ENCODE/K005724_K005706_2_lane_gembs/ENCFF174EZK_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1130527650 | 100.00 % | 565263825 | 100.00 % | 565263825 | 100.00 % |
| General Reads | 1111823909 | 98.35 % | 557319419 | 98.59 % | 554504490 | 98.10 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 3696952 | 0.33 % | 1855564 | 0.33 % | 1841388 | 0.33 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15006789 | 1.33 % | 6088842 | 1.08 % | 8917947 | 1.58 % |
| Bisulfite_reads C2T | 563896342 | 49.88 % | 282510908 | 49.98 % | 281385434 | 49.78 % |
| Bisulfite_reads G2A | 551624519 | 48.79 % | 276664075 | 48.94 % | 274960444 | 48.64 % |
| Concept | Value |
|---|---|
| Unique Fragments | 427181323 |
| Average Unique | 75.57 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 65845477390 | 38.57 % | 27361174646 | 32.06 % | 38484302744 | 45.09 % |
| Base Counts Overall C | 18411412200 | 10.79 % | 1113695445 | 1.30 % | 17297716755 | 20.27 % |
| Base Counts Overall G | 18280948845 | 10.71 % | 17087060090 | 20.02 % | 1193888755 | 1.40 % |
| Base Counts Overall T | 67026511328 | 39.26 % | 39222149271 | 45.95 % | 27804362057 | 32.58 % |
| Base Counts Overall N | 1145325387 | 0.67 % | 570758123 | 0.67 % | 574567264 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9858473558603207 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 474498128 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 565263825 |
| 150 | 565263825 |
| Insert Size Histogram |
|---|
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