/EXTERNAL ENCODE/K005724_K005706_2_lane_gembs/ENCFF270VWR_150bp_chastity
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 676376222 | 100.00 % | 338188111 | 100.00 % | 338188111 | 100.00 % |
| General Reads | 665002843 | 98.32 % | 333866838 | 98.72 % | 331136005 | 97.91 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1405551 | 0.21 % | 706039 | 0.21 % | 699512 | 0.21 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9967828 | 1.47 % | 3615234 | 1.07 % | 6352594 | 1.88 % |
| Bisulfite_reads C2T | 336595221 | 49.76 % | 168867169 | 49.93 % | 167728052 | 49.60 % |
| Bisulfite_reads G2A | 329813173 | 48.76 % | 165705708 | 49.00 % | 164107465 | 48.53 % |
| Concept | Value |
|---|---|
| Unique Fragments | 246681553 |
| Average Unique | 72.94 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 38908296260 | 38.10 % | 17045131878 | 33.38 % | 21863164382 | 42.81 % |
| Base Counts Overall C | 11372061343 | 11.13 % | 812509628 | 1.59 % | 10559551715 | 20.68 % |
| Base Counts Overall G | 10889671862 | 10.66 % | 10172425738 | 19.92 % | 717246124 | 1.40 % |
| Base Counts Overall T | 40273134765 | 39.43 % | 22693880912 | 44.44 % | 17579253853 | 34.42 % |
| Base Counts Overall N | 689645292 | 0.68 % | 342456605 | 0.67 % | 347188687 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9768793761889607 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 274461195 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 338188111 |
| 150 | 338188111 |
| Insert Size Histogram |
|---|
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