{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 67808558, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 66455833, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.01, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 89041068, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 86279398, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.9, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 62566670, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7567734, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.120955
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 75814649, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1942644, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.025624
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 62553253, 
            "distinct_read_pairs": 55588883, 
            "one_read_pair": 50138503, 
            "two_read_pair": 4358690, 
            "NRF": 0.888665, 
            "PBC1": 0.901952, 
            "PBC2": 11.503113
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 75676853, 
            "distinct_read_pairs": 73956850, 
            "one_read_pair": 72462507, 
            "two_read_pair": 1457185, 
            "NRF": 0.977272, 
            "PBC1": 0.979794, 
            "PBC2": 49.727733
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 54998936, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 54998936, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 73872005, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 73872005, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 93972, 
        "Np": 0, 
        "N_opt": 93972, 
        "N_consv": 93972, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.318722320649898, 
            "phantom_peak": 80, 
            "corr_phantom_peak": 0.2928203, 
            "argmin_corr": 1500, 
            "min_corr": 0.2052757, 
            "NSC": 1.552655, 
            "RSC": 1.295872
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.614317802384
        }, 
        "rep1-pr1": {
            "FRiP": 0.594632011254
        }, 
        "rep1-pr2": {
            "FRiP": 0.594614611289
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.591978466331
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.119861247162, 
            "auc": 0.49451028714, 
            "ch_div": 0.152307778431, 
            "elbow_pt": 7.32742145176e-285, 
            "jsd": 0.850669161778, 
            "syn_auc": 0.498862246705, 
            "syn_elbow_pt": 0.493049222529, 
            "syn_jsd": 0.568444802193
        }
    ]
}