{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 30770947, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 27952451, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.84, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 95971996, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 94226359, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.18, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 25017685, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2296962, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.091814
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 84008669, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5361458, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.06382
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 24976974, 
            "distinct_read_pairs": 22709154, 
            "one_read_pair": 20663543, 
            "two_read_pair": 1881753, 
            "NRF": 0.909204, 
            "PBC1": 0.909921, 
            "PBC2": 10.981007
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 83292380, 
            "distinct_read_pairs": 78638535, 
            "one_read_pair": 74489547, 
            "two_read_pair": 3843618, 
            "NRF": 0.944126, 
            "PBC1": 0.94724, 
            "PBC2": 19.38006
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 22720723, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 22720723, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 78647211, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 78647211, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 34685, 
        "Np": 0, 
        "N_opt": 34685, 
        "N_consv": 34685, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.178430679803453, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1881093, 
            "argmin_corr": 1500, 
            "min_corr": 0.1625395, 
            "NSC": 1.097768, 
            "RSC": 0.6214808
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.158818201582
        }, 
        "rep1-pr1": {
            "FRiP": 0.141171069178
        }, 
        "rep1-pr2": {
            "FRiP": 0.140824879433
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.12147873056
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.247810266544, 
            "auc": 0.491478803561, 
            "ch_div": 0.149982006478, 
            "elbow_pt": 2.2135986283e-117, 
            "jsd": 0.612145627574, 
            "syn_auc": 0.510628643605, 
            "syn_elbow_pt": 0.195680284571, 
            "syn_jsd": 0.310345543636
        }
    ]
}
