{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 44092047, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 43452314, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.55, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 70868087, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 62653143, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 88.41, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 35031291, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2577272, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.073571
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 46713021, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 4257819, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.091148
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 35020243, 
            "distinct_read_pairs": 32475318, 
            "one_read_pair": 30152687, 
            "two_read_pair": 2126731, 
            "NRF": 0.92733, 
            "PBC1": 0.92848, 
            "PBC2": 14.177951
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 46491830, 
            "distinct_read_pairs": 42448301, 
            "one_read_pair": 38849183, 
            "two_read_pair": 3219750, 
            "NRF": 0.913027, 
            "PBC1": 0.915212, 
            "PBC2": 12.0659
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 32454019, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 32454019, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 42455202, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42455202, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 70911, 
        "Np": 0, 
        "N_opt": 70911, 
        "N_consv": 70911, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 200, 
            "corr_est_frag_len": 0.175210942104716, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1787873, 
            "argmin_corr": 1500, 
            "min_corr": 0.1689596, 
            "NSC": 1.036999, 
            "RSC": 0.6360956
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.188251907804
        }, 
        "rep1-pr1": {
            "FRiP": 0.155834400189
        }, 
        "rep1-pr2": {
            "FRiP": 0.156100193982
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.134202087632
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.230886622328, 
            "auc": 0.489726778673, 
            "ch_div": 0.158470218483, 
            "elbow_pt": 2.15013930046e-80, 
            "jsd": 0.665217843319, 
            "syn_auc": 0.499422622356, 
            "syn_elbow_pt": 0.142076179444, 
            "syn_jsd": 0.322237505144
        }
    ]
}
