{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 90354286, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 88438507, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.88, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 111590859, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 109332265, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.98, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 78635317, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 6508930, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.082774
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 96210461, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 3273285, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.034022
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 78609875, 
            "distinct_read_pairs": 72287324, 
            "one_read_pair": 66826542, 
            "two_read_pair": 4886007, 
            "NRF": 0.919571, 
            "PBC1": 0.924457, 
            "PBC2": 13.677128
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 96161569, 
            "distinct_read_pairs": 92975007, 
            "one_read_pair": 90130461, 
            "two_read_pair": 2750935, 
            "NRF": 0.966862, 
            "PBC1": 0.969405, 
            "PBC2": 32.763573
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 72126387, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 72126387, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 92937176, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 92937176, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 20152, 
        "Np": 0, 
        "N_opt": 20152, 
        "N_consv": 20152, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 230, 
            "corr_est_frag_len": 0.199768723933735, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.205344, 
            "argmin_corr": 1500, 
            "min_corr": 0.1685748, 
            "NSC": 1.185045, 
            "RSC": 0.8483715
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.138778660468
        }, 
        "rep1-pr1": {
            "FRiP": 0.137317666639
        }, 
        "rep1-pr2": {
            "FRiP": 0.137476142625
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.136222964784
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.308808052231, 
            "auc": 0.495213413565, 
            "ch_div": 0.0973139938223, 
            "elbow_pt": 0.0, 
            "jsd": 0.582408508852, 
            "syn_auc": 0.506153016537, 
            "syn_elbow_pt": 0.196707484461, 
            "syn_jsd": 0.271499511847
        }
    ]
}
