/cemt/K005737_0_lane_gembs

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SAMPLE K005737_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1156916826 100.00 % 578458413 100.00 % 578458413 100.00 %
General Reads 1123834813 97.14 % 563218923 97.37 % 560615890 96.92 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 3458908 0.30 % 1726104 0.30 % 1732804 0.30 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 29623105 2.56 % 13513386 2.34 % 16109719 2.78 %
Bisulfite_reads C2T 576852393 49.86 % 289046742 49.97 % 287805651 49.75 %
Bisulfite_reads G2A 550441328 47.58 % 275898285 47.70 % 274543043 47.46 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 374363033
Average Unique 64.72 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 67689386860 38.75 % 29529918913 33.81 % 38159467947 43.69 %
Base Counts Overall C 18738871395 10.73 % 1108805643 1.27 % 17630065752 20.18 %
Base Counts Overall G 19234205614 11.01 % 17741074519 20.31 % 1493131095 1.71 %
Base Counts Overall T 67861581091 38.85 % 38383643312 43.94 % 29477937779 33.75 %
Base Counts Overall N 1170395766 0.67 % 583777976 0.67 % 586617790 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.989892383572527
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 425869485



Mapping Quality

Mapping Quality Histogram
K005737_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005737_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF306SYB_150bp_chastity