{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 40808989, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 39849974, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.65, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 167442145, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 163970425, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.93, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 34603421, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 814128, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.023527
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 146113996, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 17738762, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.121404
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 34589880, 
            "distinct_read_pairs": 33784277, 
            "one_read_pair": 33102205, 
            "two_read_pair": 661969, 
            "NRF": 0.97671, 
            "PBC1": 0.979811, 
            "PBC2": 50.005672
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 145869063, 
            "distinct_read_pairs": 128389051, 
            "one_read_pair": 115335862, 
            "two_read_pair": 10018831, 
            "NRF": 0.880166, 
            "PBC1": 0.898331, 
            "PBC2": 11.511908
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 33789293, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 33789293, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 128375234, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 128375234, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 861, 
        "Np": 0, 
        "N_opt": 861, 
        "N_consv": 861, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 225, 
            "corr_est_frag_len": 0.173725862256193, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1913596, 
            "argmin_corr": 1500, 
            "min_corr": 0.1702019, 
            "NSC": 1.020705, 
            "RSC": 0.1665574
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0151996423627
        }, 
        "rep1-pr1": {
            "FRiP": 0.0125241122717
        }, 
        "rep1-pr2": {
            "FRiP": 0.0126128059172
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.000851197260917
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.32993440163, 
            "auc": 0.492998262229, 
            "ch_div": 0.10806180101, 
            "elbow_pt": 1.67681678482e-174, 
            "jsd": 0.501799330649, 
            "syn_auc": 0.5103830047, 
            "syn_elbow_pt": 0.0696468352438, 
            "syn_jsd": 0.185210797017
        }
    ]
}
