{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 122947456, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 118915150, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 189908464, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 185861562, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.87, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 107172512, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 15423414, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.143912
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 163736579, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 19068127, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.116456
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 105422431, 
            "distinct_read_pairs": 91785149, 
            "one_read_pair": 81678401, 
            "two_read_pair": 7853416, 
            "NRF": 0.870642, 
            "PBC1": 0.889887, 
            "PBC2": 10.400366
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 158710296, 
            "distinct_read_pairs": 144684098, 
            "one_read_pair": 133557344, 
            "two_read_pair": 9161482, 
            "NRF": 0.911624, 
            "PBC1": 0.923096, 
            "PBC2": 14.578137
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 91749098, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 91749098, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 144668452, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 144668452, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 26536, 
        "Np": 0, 
        "N_opt": 26536, 
        "N_consv": 26536, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 185, 
            "corr_est_frag_len": 0.247791398531179, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.239392, 
            "argmin_corr": 1500, 
            "min_corr": 0.1683178, 
            "NSC": 1.472164, 
            "RSC": 1.118177
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.21459066685
        }, 
        "rep1-pr1": {
            "FRiP": 0.21186665018
        }, 
        "rep1-pr2": {
            "FRiP": 0.211956068005
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.211080553904
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.285185470375, 
            "auc": 0.495758111024, 
            "ch_div": 0.100935461363, 
            "elbow_pt": 0.0, 
            "jsd": 0.677374790326, 
            "syn_auc": 0.498551731105, 
            "syn_elbow_pt": 0.264332583884, 
            "syn_jsd": 0.323848628126
        }
    ]
}
