{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 103071811, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 97917154, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 95.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 288186903, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 284256259, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.64, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 76609654, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 15271601, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.199343
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 220679605, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 56011118, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.253812
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 76605969, 
            "distinct_read_pairs": 61708201, 
            "one_read_pair": 50592464, 
            "two_read_pair": 8255133, 
            "NRF": 0.805527, 
            "PBC1": 0.819866, 
            "PBC2": 6.128607
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 220545883, 
            "distinct_read_pairs": 164927958, 
            "one_read_pair": 129793405, 
            "two_read_pair": 22932910, 
            "NRF": 0.747817, 
            "PBC1": 0.78697, 
            "PBC2": 5.659701
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 61338053, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 61338053, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 164668487, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 164668487, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 16787, 
        "Np": 0, 
        "N_opt": 16787, 
        "N_consv": 16787, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.17042404561918, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1799579, 
            "argmin_corr": 1500, 
            "min_corr": 0.1665155, 
            "NSC": 1.023472, 
            "RSC": 0.2907609
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.074269360451
        }, 
        "rep1-pr1": {
            "FRiP": 0.0687281046008
        }, 
        "rep1-pr2": {
            "FRiP": 0.0686628567717
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.0623344858059
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.298339059331, 
            "auc": 0.49251086487, 
            "ch_div": 0.120261098172, 
            "elbow_pt": 2.38122169159e-152, 
            "jsd": 0.524423474845, 
            "syn_auc": 0.492936671892, 
            "syn_elbow_pt": 0.109397847891, 
            "syn_jsd": 0.239691844774
        }
    ]
}
