{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 72757624, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 70972645, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.55, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 78084181, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 75629600, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.86, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 65972449, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 2154852, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.032663
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 66446155, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1901121, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.028611
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 65945267, 
            "distinct_read_pairs": 63926817, 
            "one_read_pair": 62008802, 
            "two_read_pair": 1849817, 
            "NRF": 0.969392, 
            "PBC1": 0.969997, 
            "PBC2": 33.521587
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 66270837, 
            "distinct_read_pairs": 64617098, 
            "one_read_pair": 63173547, 
            "two_read_pair": 1404707, 
            "NRF": 0.975046, 
            "PBC1": 0.97766, 
            "PBC2": 44.972757
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 63817597, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 63817597, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 64545034, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 64545034, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 141601, 
        "Np": 0, 
        "N_opt": 141601, 
        "N_consv": 141601, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 210, 
            "corr_est_frag_len": 0.187384789970383, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1905071, 
            "argmin_corr": 1500, 
            "min_corr": 0.179705, 
            "NSC": 1.042736, 
            "RSC": 0.7109532
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.430728462883
        }, 
        "rep1-pr1": {
            "FRiP": 0.385905332021
        }, 
        "rep1-pr2": {
            "FRiP": 0.38585818652
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.382626823201
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.205377811077, 
            "auc": 0.494906606028, 
            "ch_div": 0.111397896757, 
            "elbow_pt": 0.0, 
            "jsd": 0.736334919429, 
            "syn_auc": 0.501434201956, 
            "syn_elbow_pt": 0.28462164248, 
            "syn_jsd": 0.401621821124
        }
    ]
}
