{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 156411019, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 152749597, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 97.66, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 136678673, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 133952967, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.01, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 118960839, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 12856841, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.108076
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 101629545, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 5637640, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.055472
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 118955503, 
            "distinct_read_pairs": 107722608, 
            "one_read_pair": 98326213, 
            "two_read_pair": 7875496, 
            "NRF": 0.905571, 
            "PBC1": 0.912772, 
            "PBC2": 12.485082
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 101457032, 
            "distinct_read_pairs": 96084437, 
            "one_read_pair": 91043636, 
            "two_read_pair": 4765032, 
            "NRF": 0.947046, 
            "PBC1": 0.947538, 
            "PBC2": 19.106616
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 106103998, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 106103998, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 95991905, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 95991905, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 4246, 
        "Np": 0, 
        "N_opt": 4246, 
        "N_consv": 4246, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 205, 
            "corr_est_frag_len": 0.172751522586914, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1768142, 
            "argmin_corr": 1500, 
            "min_corr": 0.1708131, 
            "NSC": 1.011348, 
            "RSC": 0.3230156
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.0173750457409
        }, 
        "rep1-pr1": {
            "FRiP": 0.0189058985549
        }, 
        "rep1-pr2": {
            "FRiP": 0.0188126098465
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.00176170054145
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.295680506286, 
            "auc": 0.494297734972, 
            "ch_div": 0.117526160687, 
            "elbow_pt": 7.09351796414e-264, 
            "jsd": 0.527862081099, 
            "syn_auc": 0.505231025636, 
            "syn_elbow_pt": 0.0363176175627, 
            "syn_jsd": 0.246003577637
        }
    ]
}
