{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 49680565, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 48728749, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 98.08, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 121828491, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 117832970, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.72, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 43391268, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1190805, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.027443
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 104020403, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 7181231, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.069037
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 43388110, 
            "distinct_read_pairs": 42204979, 
            "one_read_pair": 41087687, 
            "two_read_pair": 1086064, 
            "NRF": 0.972731, 
            "PBC1": 0.973527, 
            "PBC2": 37.831736
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 103736746, 
            "distinct_read_pairs": 96837357, 
            "one_read_pair": 90710367, 
            "two_read_pair": 5672594, 
            "NRF": 0.933491, 
            "PBC1": 0.936729, 
            "PBC2": 15.990985
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 42200463, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 42200463, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 96839172, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 96839172, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 103146, 
        "Np": 0, 
        "N_opt": 103146, 
        "N_consv": 103146, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 165, 
            "corr_est_frag_len": 0.178036061122298, 
            "phantom_peak": 75, 
            "corr_phantom_peak": 0.1854464, 
            "argmin_corr": 1500, 
            "min_corr": 0.174209, 
            "NSC": 1.021968, 
            "RSC": 0.3405659
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.236118470669
        }, 
        "rep1-pr1": {
            "FRiP": 0.188603025235
        }, 
        "rep1-pr2": {
            "FRiP": 0.188627765988
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.168089244161
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.265425563435, 
            "auc": 0.493735408825, 
            "ch_div": 0.109659206775, 
            "elbow_pt": 2.35527779185e-218, 
            "jsd": 0.650873874919, 
            "syn_auc": 0.505820755684, 
            "syn_elbow_pt": 0.191129522558, 
            "syn_jsd": 0.295286714891
        }
    ]
}