{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 17117463, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 15727912, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 91.88, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 22485486, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21702857, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 11862895, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 474440, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.039994
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 16638409, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 103528, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.006222
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 11861299, 
            "distinct_read_pairs": 11400662, 
            "one_read_pair": 10967082, 
            "two_read_pair": 409544, 
            "NRF": 0.961165, 
            "PBC1": 0.961969, 
            "PBC2": 26.778764
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 16625947, 
            "distinct_read_pairs": 16528436, 
            "one_read_pair": 16450649, 
            "two_read_pair": 75869, 
            "NRF": 0.994135, 
            "PBC1": 0.995294, 
            "PBC2": 216.829654
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 11388455, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 11388455, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 16534881, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16534881, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 69435, 
        "Np": 0, 
        "N_opt": 69435, 
        "N_consv": 69435, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 160, 
            "corr_est_frag_len": 0.236283998774003, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.2182457, 
            "argmin_corr": 1500, 
            "min_corr": 0.1690713, 
            "NSC": 1.397541, 
            "RSC": 1.366822
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.318396599646
        }, 
        "rep1-pr1": {
            "FRiP": 0.336938364194
        }, 
        "rep1-pr2": {
            "FRiP": 0.336534747806
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.272889817819
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.150754797613, 
            "auc": 0.482616572072, 
            "ch_div": 0.385561824485, 
            "elbow_pt": 1.50314453829e-27, 
            "jsd": 0.654238325063, 
            "syn_auc": 0.485276720315, 
            "syn_elbow_pt": 0.257916265675, 
            "syn_jsd": 0.374859632827
        }
    ]
}