{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 16179772, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 14672214, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 90.68, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 22485486, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21702857, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 11140671, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 177866, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.015965
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 16638409, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 103528, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.006222
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 11139691, 
            "distinct_read_pairs": 10966036, 
            "one_read_pair": 10795102, 
            "two_read_pair": 168351, 
            "NRF": 0.984411, 
            "PBC1": 0.984412, 
            "PBC2": 64.122589
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 16625947, 
            "distinct_read_pairs": 16528436, 
            "one_read_pair": 16450649, 
            "two_read_pair": 75869, 
            "NRF": 0.994135, 
            "PBC1": 0.995294, 
            "PBC2": 216.829654
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 10962805, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 10962805, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 16534881, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16534881, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 99162, 
        "Np": 0, 
        "N_opt": 99162, 
        "N_consv": 99162, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 14670206, 
            "est_frag_len": 155, 
            "corr_est_frag_len": 0.175797872648686, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.1804657, 
            "argmin_corr": 1500, 
            "min_corr": 0.1717496, 
            "NSC": 1.023571, 
            "RSC": 0.4644593
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.234888090405
        }, 
        "rep1-pr1": {
            "FRiP": 0.254555147637
        }, 
        "rep1-pr2": {
            "FRiP": 0.254167623011
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.146525998633
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.172004383543, 
            "auc": 0.482293797486, 
            "ch_div": 0.372198474931, 
            "elbow_pt": 1.56482055014e-26, 
            "jsd": 0.638035963485, 
            "syn_auc": 0.503978948864, 
            "syn_elbow_pt": 0.140680823143, 
            "syn_jsd": 0.302342474331
        }
    ]
}