{
    "name": "Untitled", 
    "desc": "No description", 
    "flagstat_qc": [
        {
            "total": 51409252, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 41012825, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 79.78, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_flagstat_qc": [
        {
            "total": 22485486, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 21702857, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 96.52, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "dup_qc": [
        {
            "unpaired_reads": 21056257, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 1164089, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.055285
        }
    ], 
    "ctl_dup_qc": [
        {
            "unpaired_reads": 16638409, 
            "paired_reads": 0, 
            "unmapped_reads": 0, 
            "unpaired_dupes": 103528, 
            "paired_dupes": 0, 
            "paired_opt_dupes": 0, 
            "dupes_pct": 0.006222
        }
    ], 
    "pbc_qc": [
        {
            "total_read_pairs": 21055303, 
            "distinct_read_pairs": 19924467, 
            "one_read_pair": 18900278, 
            "two_read_pair": 962728, 
            "NRF": 0.946292, 
            "PBC1": 0.948596, 
            "PBC2": 19.632002
        }
    ], 
    "ctl_pbc_qc": [
        {
            "total_read_pairs": 16625947, 
            "distinct_read_pairs": 16528436, 
            "one_read_pair": 16450649, 
            "two_read_pair": 75869, 
            "NRF": 0.994135, 
            "PBC1": 0.995294, 
            "PBC2": 216.829654
        }
    ], 
    "nodup_flagstat_qc": [
        {
            "total": 19892168, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 19892168, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "ctl_nodup_flagstat_qc": [
        {
            "total": 16534881, 
            "total_qc_failed": 0, 
            "duplicates": 0, 
            "duplicates_qc_failed": 0, 
            "mapped": 16534881, 
            "mapped_qc_failed": 0, 
            "mapped_pct": 100.0, 
            "paired": 0, 
            "paired_qc_failed": 0, 
            "read1": 0, 
            "read1_qc_failed": 0, 
            "read2": 0, 
            "read2_qc_failed": 0, 
            "paired_properly": 0, 
            "paired_properly_qc_failed": 0, 
            "paired_properly_pct": 0.0, 
            "with_itself": 0, 
            "with_itself_qc_failed": 0, 
            "singletons": 0, 
            "singletons_qc_failed": 0, 
            "singletons_pct": 0.0, 
            "diff_chroms": 0, 
            "diff_chroms_qc_failed": 0
        }
    ], 
    "overlap_reproducibility_qc": {
        "Nt": 0, 
        "N1": 159081, 
        "Np": 0, 
        "N_opt": 159081, 
        "N_consv": 159081, 
        "opt_set": "rep1-pr", 
        "consv_set": "rep1-pr", 
        "rescue_ratio": 0.0, 
        "self_consistency_ratio": 1.0, 
        "reproducibility": "pass"
    }, 
    "xcor_score": [
        {
            "num_reads": 15000000, 
            "est_frag_len": 190, 
            "corr_est_frag_len": 0.236296006160307, 
            "phantom_peak": 35, 
            "corr_phantom_peak": 0.276132, 
            "argmin_corr": 1500, 
            "min_corr": 0.2089262, 
            "NSC": 1.131003, 
            "RSC": 0.4072542
        }
    ], 
    "frip_macs2_qc": {
        "rep1": {
            "FRiP": 0.333407117751
        }, 
        "rep1-pr1": {
            "FRiP": 0.355876408569
        }, 
        "rep1-pr2": {
            "FRiP": 0.355758467453
        }
    }, 
    "overlap_frip_qc": {
        "rep1-pr": {
            "FRiP": 0.280339346654
        }
    }, 
    "jsd_qc": [
        {
            "pct_gen_enrich": 0.165378285186, 
            "auc": 0.48686037584, 
            "ch_div": 0.294467525301, 
            "elbow_pt": 9.11053356778e-49, 
            "jsd": 0.722080715911, 
            "syn_auc": 0.510871235996, 
            "syn_elbow_pt": 0.206178235395, 
            "syn_jsd": 0.378791372123
        }
    ]
}